Browse of TCMCG051C15243 protein

CDS

Accession Number	TCMCG051C15243
gbkey	CDS
Protein Id	XP_006385023.2
Location	join(22897219..22897557,22898157..22898375,22900261..22900372,22900472..22900654,22901103..22901182,22901488..22901610,22901803..22901889,22903544..22903644,22904643..22904700,22904971..22905036,22906055..22906137,22906227..22906410,22907428..22907574,22907664..22907765,22907864..22908016,22909536..22909640,22911328..22911468,22911604..22911693,22911780..22911836,22913461..22913544,22915226..22915324,22915438..22915578,22916338..22916408,22917312..22917381,22917661..22917753,22919657..22919869,22920572..22920664,22921553..22921675,22922742..22922819)
Gene	LOC18098308
GeneID	18098308
Organism	Populus trichocarpa

Protein

Length	1164aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA17973
db_source	XM_006384961.2
Definition	DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X4 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category	A
Description	ATP-dependent RNA helicase
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03012        [VIEW IN KEGG]
KEGG_ko	ko:K18995        [VIEW IN KEGG]
EC	3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	-
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003724        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004004        [VIEW IN EMBL-EBI] GO:0004386        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008026        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008186        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016282        [VIEW IN EMBL-EBI] GO:0016462        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0016817        [VIEW IN EMBL-EBI] GO:0016818        [VIEW IN EMBL-EBI] GO:0016887        [VIEW IN EMBL-EBI] GO:0017111        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0042623        [VIEW IN EMBL-EBI] GO:0043021        [VIEW IN EMBL-EBI] GO:0043024        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0044877        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0070035        [VIEW IN EMBL-EBI] GO:0070993        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:0140098        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTTTTCTACTTCCACTCCTTGTGAGCACCTTGAGGCAATAACATCATTGGACGTGGAAGGTGATTCCACCATTGTTGAATCAATAGTTGATGAAAATGATTTGGAAAGTTCAAGCTCCATTGGTTTTCCATTGAATCCTGTTCCCTCTAGTGTGCCCCTTGAGGGAGAAATTGTCTCGGAAGAATCGGAAGATGTGGAGATTGGCGACTTCTTCATAGATGATGCATCGTCTAATGATGCTTTACCTCCTGGAATATTGGAGTTACAGAAGAGGGAAAAAATGAGAGAGCTGTGTAGTGAGAAGAATTTAGAGAAATTAGAAGGTATCTGGAAGAAGGGGGACCCGCAAAAGATTCCTAAAGCTGTTCTTCACCAACTATGTCAAAAATCAGGCTGGGAAGCTCCAAAATTCAATAAAGTGCTTGAAAGGGAACTAGGTTTCTCTTATGCTGTTAGCATATTACGCAAAGCTAGTGGGAGGGGCAAGAGCAGAAAAGCTGGGGGGCTTATCAGCCTTCAACTTCCTGATCAGGATGACACATTTGAATCTGCTGAGGATGCCCAGAACAGAGTTGCAGCATTTGCTCTTCATCAACTCTTTCCTGATCTTCCTATTCACCTAGCAATCATCAACCCTTACTCTTCTCTTGTTTTGCAGTGGAAACAAGGGGAAACATCAAAAAGAGTGGAAGACAGTGTGGAGGATCGAAGGGCTGGTTTTGTGGATCTATTATTGAAGGCAGATGGTTCTAGTTCATCTGCTGTTGATGCTACAACTAGTTCTCAAGAAACTTTAAAAATTACCGATGTCGAAGAAACCAAGGATTCTGGTGCTGATGCAAAAGTAGAAAGAAAAAAATATGCTAAGGATGCAGAAAGTTCTTATTTGAGACAGGAGCAAGAGTCTAAAAGGAAATTGAAGAAATACAAGGAAATGCTGTGCTCTAGAGCTGCACTTCCTATTGCTGGATTGAAGGTTGATATTTTACAAATGCTGAAGGAGAATGATGTTCTTGTTGTTTGTGGAGAAACAGGTTCTGGAAAGACTACTCAGGTCCCACAATTTATACTGGATGACATGATTGAGTCAGGTCATGGTGGAAACTGTAACATTATATGCACACAACCAAGAAGAATAGCGGCTATATCTGTTGCTGAAAGAGTTGCTGATGAGCGCTGTGAACCTTCTCCTGGTGCAGTTGGTTCTTTGGTTGGCTATCAAGTTCGGCTTGATAGCGCAAGGAATGAAAAAACAAAACTTCTCTTTTGTACAACAGGCATTCTTCTAAGGAAGCTTGCGGGGGATAGGAGTTTGAGTGGAATAACACATGTCATAGTTGATGAAGTGCATGAACGATCTCTTTTGGGTGATTTTCTACTCATTGTTTTGAAGAACCTGATTGAGAAGCAATCTTCTCAAGACACACCAAAACTTAAAGTTATTCTTATGTCTGCCACAGTAGATTCAAGTTTATTTTCGAGGTACTTTGGACAATGCCCTGTACTTACTGCTCAAGGCCGTACACATCCTGTGACAAATTACTTTCTTGAGGATATATATGAATACATCAATTATAACCTGGCTTCAGATGCTCCAGCTGCTTTAAGATACGAAACATCCGCATTTGATAAGAGTGGTCCTGTAGATAACCACAGAGGGAAGAAGAATCTAGTTTTATCTGCATGGGGTGATGATTCTCAGCTTTCAGAAGACTGTATTAACCCCCATTATATTTCAACTAGCTACCAAACTTACAGTGAGCAAACACAAAAGAATTTGAAAAGATTGAATGAAGAAATCATTGATTATGACCTTCTTGAAGACTTGATATGTTATGTTGATGAAACATGTGGTGAGGGTGCCATACTCATCTTTTTGCCTGGCGTGTCTGAAATTTATATGCTACTCGATAGGTTGGTTGCTTCTTATCGATTTGGAGGACCATCTTCTGATTGGGTTCTTCCTTTGCATTCATCTATAGCATCAAAGGACCAAAAAAAGGTGTTTCTATGGCCTCCTGAAAACATACGCAAGGTTATTATAGCCACCAACATTGCAGAGACAAGTTTAACAATAGATGATGTCGTATATGTGATTGATTGTGGAAAACACAAGGAAAATCGTTATAATCCTCAGAAGAAATTGACAAGCATGGTTGAAGATTGGATATCTCAAGCAAATGCAAGGCAGCGCCGAGGGAGAGCTGGACGAGTAAAACCTGGAATTTGCTTTTGCTTGTACACACGCCACAGATTTGAAAAACTCATGCGTCCTTATCAGGTTCCCGAGATGCTTCGGATGCCATTAGTGGAGCTTTCTCTGCAAATTAAATTACTTTCTCTGGGACACATAAAGCCATTTTTATCCAAGGCTTTAGAACCTCCAAGGGAGGAGGCTATGACTTCTGCAATTTCACTGTTGTATGAGGTTGGAGCTTTAGAAGGGGATGAACAATTGACACCTCTTGGACATCATTTGGCAAAACTTCCGGTCGATGTACTGATTGGAAAGATGCTGCTTTATGGTGCAATATTTGGTTGCTTATCACCTATTCTGTCAATTTCTGCATTCCTGAGTTACAAGTCACCTTTTGTGTACCCAAAAGATGAGAAGCAAAATGTTGAAAGGGCAAAGCTTGCACTGTTAGCTGACAAGATAGATGGCTCAAATGATTCAAATTATAATGACAGGCTTTCTGACCACCTCTTAATGATGGTTGCATACAAAAAATGGGAGAAGATTTTGAGCGAGAGGGGATTTAAAGCTGCACAGCAATTTTGTGCTACTTATTTTTTGAGCAGTTCAGTTATGCACATGATAAGGGACATGAGGACACAGTTTGGAACACTGCTAGCAGACATTGGGCTTATCAGTATTCCAAAGAGTTATCAGGTTGGGAGAATGAAGAAAGAGAATCTTGATAGTTGGCTGTCTGAAAAATCACAACCATTCAACATGTATTCACATCATTCCTCACTTGTGAAGGCAATTTTATGTGCAGGTTTATACCCCAATGTTGCTGCAACCGAACTAGGAATTACTGCAGCAACTCTCAATGGCCTAAAACAGTCCAGCAGGCCTGGAAAAAAGGATCATCCAATATGGTACGATGGAAGAAGAGAGGTTCACATACACCCTTCTTCGGTCAACTGTAACATGAAAGCATTTCCGCACCCATTTCTTGTGTTCCTTGAAAAGGTTGAGACCAACAAAGTATTTCTGCGAGATACTACTATTATATCTCCCTTCTCTATCTTGCTCTTTGGTGGCGAAATTAACATTCAACACCAGACTGGTCTTCTCACGATAGATGGATGGCTAAAGCTGAAAGCTTCAGCCCAATATGCTGTCTTATTTAAAGAACTCCGATCAACACTTCATGCTCTATTGAAGGAGCTGATTCGAAAGCCAGAGAATGCAACTCTTGTGGATAATGAGGTCGTCAAATCCATGATTCAGCTGTTGTTAGATGAAGACAAACCCCAAACATGA

Protein:   MFSTSTPCEHLEAITSLDVEGDSTIVESIVDENDLESSSSIGFPLNPVPSSVPLEGEIVSEESEDVEIGDFFIDDASSNDALPPGILELQKREKMRELCSEKNLEKLEGIWKKGDPQKIPKAVLHQLCQKSGWEAPKFNKVLERELGFSYAVSILRKASGRGKSRKAGGLISLQLPDQDDTFESAEDAQNRVAAFALHQLFPDLPIHLAIINPYSSLVLQWKQGETSKRVEDSVEDRRAGFVDLLLKADGSSSSAVDATTSSQETLKITDVEETKDSGADAKVERKKYAKDAESSYLRQEQESKRKLKKYKEMLCSRAALPIAGLKVDILQMLKENDVLVVCGETGSGKTTQVPQFILDDMIESGHGGNCNIICTQPRRIAAISVAERVADERCEPSPGAVGSLVGYQVRLDSARNEKTKLLFCTTGILLRKLAGDRSLSGITHVIVDEVHERSLLGDFLLIVLKNLIEKQSSQDTPKLKVILMSATVDSSLFSRYFGQCPVLTAQGRTHPVTNYFLEDIYEYINYNLASDAPAALRYETSAFDKSGPVDNHRGKKNLVLSAWGDDSQLSEDCINPHYISTSYQTYSEQTQKNLKRLNEEIIDYDLLEDLICYVDETCGEGAILIFLPGVSEIYMLLDRLVASYRFGGPSSDWVLPLHSSIASKDQKKVFLWPPENIRKVIIATNIAETSLTIDDVVYVIDCGKHKENRYNPQKKLTSMVEDWISQANARQRRGRAGRVKPGICFCLYTRHRFEKLMRPYQVPEMLRMPLVELSLQIKLLSLGHIKPFLSKALEPPREEAMTSAISLLYEVGALEGDEQLTPLGHHLAKLPVDVLIGKMLLYGAIFGCLSPILSISAFLSYKSPFVYPKDEKQNVERAKLALLADKIDGSNDSNYNDRLSDHLLMMVAYKKWEKILSERGFKAAQQFCATYFLSSSVMHMIRDMRTQFGTLLADIGLISIPKSYQVGRMKKENLDSWLSEKSQPFNMYSHHSSLVKAILCAGLYPNVAATELGITAATLNGLKQSSRPGKKDHPIWYDGRREVHIHPSSVNCNMKAFPHPFLVFLEKVETNKVFLRDTTIISPFSILLFGGEINIQHQTGLLTIDGWLKLKASAQYAVLFKELRSTLHALLKELIRKPENATLVDNEVVKSMIQLLLDEDKPQT